So far, MSE only cries about 1 keygen which is Tuvi's method of activation. Of course, one can not update MSE definitions which by itself is not recommended.
windows defender detected my old activator but it didnt disable my activtion however it has unactivated itself 4 times
That may come as a surprise to Microsoft: h**p://support.microsoft.com/kb/971606 Only a few more posts and I won't have to mangle urls
MSSECES installer does not install/use WAT, it uses the same file (legitlib.dll) that Windows Defender used to check authenticity...the trick with the Windows Defender MSI installer to get around it checking if your OS was genuinie was to silently install it using /qb or /qn. Trick will however not work with MSSECES You may have better luck looking for a patched legitlib.dll
I dont think it will flag any systems with loaders and what not until the loader gets into the WAT system if ever. I think all it does is make the validation run more often actually. I would not worry about it too much, if all else fails get a bios mod lol.